CDS

Accession Number TCMCG051C43525
gbkey CDS
Protein Id XP_024443046.1
Location complement(join(4652615..4652688,4652969..4653077,4653322..4653432,4653803..4653916,4654019..4654153,4654240..4654388,4654496..4654574,4654684..4654836,4654909..4654965,4655080..4655162,4655942..4656041,4656131..4656337,4656898..4656954))
Gene LOC7488070
GeneID 7488070
Organism Populus trichocarpa

Protein

Length 475aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024587278.1
Definition prolycopene isomerase, chloroplastic isoform X4 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category H
Description Prolycopene isomerase
KEGG_TC -
KEGG_Module M00097        [VIEW IN KEGG]
KEGG_Reaction R07512        [VIEW IN KEGG]
KEGG_rclass RC01960        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K09835        [VIEW IN KEGG]
EC 5.2.1.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009662        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016859        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046608        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATATACTTTTGATGTTGGCTCTTCTGTTATGTTTGGTTTCAGTGATAAGGTCAGGCAACCTAAATTTGATAACACAGGCATTGGCAGCAGTTGGCTGTGAAATGGAGGTGATTCCTGACCCAACTACTGTCCATTTTCATCTACCCAATGACCTTTCTGTTCAAGTTCACAGAGAGTACATCGACTTCATCTCAGAACTTGCTGCTAAATTTCCCCATGAAAAGGATGGGATCCTTAAATTCTACGGTGAATGCTGGAAGATATTCAATGCCTTGAACTCTCTGGAACTGAAGTCACTTGAGGAGCCAATCTACCTGTTTGGACAATTTTTTCAGAAACCTCTTGAATGCTTGACACTGGCTTATTATCTACCTCAAAATGCTGGAGATATTGCTCGAAAGTACATAAAGGATCCTCAGTTATTGTCTTTCATTGATGCAGAGTGTTTCATAGTGAGCACAGTCAATGCTTTGCAGACTCCAATGATCAATGCGGCCATGGTTCTATGTGATAGGCATTTTGGAGGGATCAATTACCCTGTTGGTGGGGTTGGTGGAATTGCGAAGTCCTTATCAAAAGGTCTGGTTGATCAGGGCAGTGAAATACTTTACAGGGCAAATGTGACCAACATCATTCTTGAGCATGGAAAGGCTGTAGGAGTAAGGCTTTCAGATGGAAGGGAGTTCTTTGGAAAAACCATAATCTCAAATGCTACTAGATGGGATACCTTCGGGAAGTTGTTAAAAGGAGAAACCCTTCCAAAAGAAGAAGAAAATTTCCAAAAAGTTTATGTTAAGGCTCCATCTTTTCTTTCCATTCATATGGGTGTTAAAGCCGAGGTTCTACCACCAGATACAGATTGCCACCACTTTGTGCTTGAGGATGACTGGGCAAGATTAGAGGAGCCTTATGGAAGCATATTTCTAAGCATTCCAACTATTCTTGATTCGTCATTGGCTCCGGAAGGCCATCATATACTTCACATATTTACAACATCTTCCATTGAAGACTGGGAGGGACTCTCGACAAAGGACTATGAGGCCAAGAAGAAGGTTGCGGCTGATGAGATTATAAGCAGATTGGAGAAGAAACTTTTTCCAGGGATCAGATCATCAATTGCTTTCATGGAGGTGGGTTCACCCAAGACACACAGGCGGTACCTGGCTCGTGATAAGGGTACTTATGGACCCATGCCACGCAGAACTCCTAAAGGTTTATTGGGAATGCCATTCAATACGACAGCTGTAGATGGTCTTTACTGTGTTGGCGATAGCTGCTTTCCAGGACAGGGCGTGATAGCTGTAGCTTTTTCAGGAGTAATGTGTGCTCATCGAGTAGCTGCTGATATTGGCATTGAGAAAAAGTCTCCTGTACTGGATGCTGCTCTCCTTCGGCTTCTTGGCTGGTTAAGGACCTTGGCATGA
Protein:  
MDILLMLALLLCLVSVIRSGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVQVHREYIDFISELAAKFPHEKDGILKFYGECWKIFNALNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINAAMVLCDRHFGGINYPVGGVGGIAKSLSKGLVDQGSEILYRANVTNIILEHGKAVGVRLSDGREFFGKTIISNATRWDTFGKLLKGETLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWARLEEPYGSIFLSIPTILDSSLAPEGHHILHIFTTSSIEDWEGLSTKDYEAKKKVAADEIISRLEKKLFPGIRSSIAFMEVGSPKTHRRYLARDKGTYGPMPRRTPKGLLGMPFNTTAVDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGIEKKSPVLDAALLRLLGWLRTLA